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Global Parameters
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Summary
Cosmos System Details
Global Parameters
Inoculation
Start of Run
Termination
Environment
Organism
Cell
Mutations and Flaws
Input and Output
The
REPLiCa
Instruction Set
Predefined Ancestor Programs
Ancestor A1
Ancestor A2
Running Cosmos
Format of Input and Output Files
Input Files
The Genetic Code (
genetic_code.ini
)
Parameter specification (
params.ini
)
User-defined ancestor programs (
ancestor.ini
)
Output Files
General Information About Run (
run.log
)
Species Concentrations (
concentrations.dat
)
Species Details (
species_current.dat
,
species_extinct.dat
)
Information on Individual Organisms (
morgue.dat
)
Phylogenetic Information (
phylogeny.dat
)
Neutral Model Data (
neutral.dat
)
Backup File (
autosave.ser
)
Visualisation Output Files
Implementation Details
Tim Taylor
1999-05-29